Before the possible application of any base or stain to a door, there are some essential steps to undertake. Locate as close to a dust free environment as possible to work on the doors. Wipe down the doors to remove as much dust and grime as possible. Lightly sand the whole door with 220-grit sandpaper. Wipe the door down again to remove any residue from the sanding.
The wood type of the door is the most important factor in determining if a base is necessary. Soft or porous woods like fir, pine, Aspen and maple require a base layer because these woods will absorb the stain unevenly, causing a splotching effect. Some stain manufacturers such as Minwax sell a preconditioner that they ask be applied no matter what type of wood is being stained. A hardwood door does not usually require a base, and not using a base might be preferable for for aesthetic reasons.
Another reason a waterproof base or any other kind of base might not be necessary to apply to the door is that the use of a varnish will seal the door, thus protecting it. Also, any finish applied helps to protect the wood while certain stains are manufactured as also sealants.
The quality of the sanding will affect the quality of the finish. Always completely follow the manufacturer's preparation and application instructions. If you have any questions, contact the manufacturer.